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Essential Proteins Identification Based on Integrated Network

  • Qufu Normal University
  • Shandong Vocational and Technical University of International Studies

科研成果: 书/报告/会议事项章节会议稿件同行评审

3 引用 (Scopus)

摘要

Identifying essential proteins is important for understanding cellular life and pathogenic mechanisms. In addition to experimental methods, many computing approaches have been employed to identify essential proteins. Many of these methods usually consider the topological structure of the protein-protein interaction network (PPIN). However, the fact that the PPIN includes many false negative interactions is ignored. In this paper, an integrated PPIN that considers protein interactions and gene co-expression is presented. With more false negative interactions being considered, more meaningful essential proteins can be identified on the integrated PPIN. To verify the performance of this method, an experiment is carried out on data from Saccharomyces cerevisiae. The results demonstrate that ITPPIN can identify essential proteins is more effective than PPIN.

源语言英语
主期刊名Intelligent Computing Theories and Application - 16th International Conference, ICIC 2020, Proceedings
编辑De-Shuang Huang, Vitoantonio Bevilacqua, Abir Hussain
出版商Springer Science and Business Media Deutschland GmbH
81-91
页数11
ISBN(印刷版)9783030607982
DOI
出版状态已出版 - 2020
已对外发布
活动16th International Conference on Intelligent Computing, ICIC 2020 - Bari , 意大利
期限: 2 10月 20205 10月 2020

出版系列

姓名Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
12463 LNCS
ISSN(印刷版)0302-9743
ISSN(电子版)1611-3349

会议

会议16th International Conference on Intelligent Computing, ICIC 2020
国家/地区意大利
Bari
时期2/10/205/10/20

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